translate_join.hpp File Reference

Provides seqan3::views::translate_join. More...

#include <seqan3/std/concepts>
#include <seqan3/std/ranges>
#include <stdexcept>
#include <vector>
#include <seqan3/alphabet/views/translate.hpp>
#include <seqan3/core/range/type_traits.hpp>
#include <seqan3/utility/container/small_string.hpp>

Include dependency graph for translate_join.hpp:

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Classes
struct	seqan3::detail::translate_join_fn
	Definition of the range adaptor object type for seqan3::views::translate_join. More...
class	seqan3::detail::view_translate_join< urng_t >
	The return type of seqan3::views::translate_join. More...

Namespaces
	seqan3
	The main SeqAn3 namespace.
	seqan3::detail
	The internal SeqAn3 namespace.
	seqan3::views
	The SeqAn namespace for views.

Functions
template<typename urng_t >
	seqan3::detail::view_translate_join (urng_t &&, translation_frames const =translation_frames{}) -> view_translate_join< std::views::all_t< urng_t >>
	Class template argument deduction for view_translate_join.

Variables
constexpr auto	seqan3::views::translate_join
	A view that translates nucleotide into aminoacid alphabet with 1, 2, 3 or 6 frames. Input and output range are always two-dimensional. More...

Detailed Description

Provides seqan3::views::translate_join.

Author

Sara Hetzel <sara.hetzel AT fu-berlin.de>